Platform

BiowebDB has now FTP mirrors of Genbank, PDB and Uniprot:

Genbank mirror: http://www.biowebdb.org/pub/genbank/

PDB mirror: http://www.biowebdb.org/pub/pdb/

Conserved Domain Database (CDD): http://www.biowebdb.org/pub/cdd/

UniProt mirror: http://www.biowebdb.org/pub/uniprot/

In house software

Genomic Analyses Resources for Sequence Annotation (GARSA) : http://garsa.biowebdb.org (GARSA has been replaced by STINGRAY)

System for Integrated Genomic Resources and Analysis (STINGRAY) : http://stingray.biowebdb.org

ProtoGIM : http://protogim.biowebdb.org

ProtozoaDB : http://protozoadb.biowebdb.org

OrthoSearch (Orthologous Gene Searcher)  : http://wiki.biowebdb.org/index.php/Orthosearch

Genoogle (Similar DNA Sequences Searching Engine and Tools) : http://genoogle.biowebdb.org

ARPA (Automatic Reconstruction for Phylogenomic Analysis): http://arpa.biowebdb.org

Blast Grid (Globus-based): http://grid.biowebdb.org/

OrthoMCL grid (Globus-based): http://grid.biowebdb.org/

PEDRO : http://pedro.biowebdb.org/

Primer Designer: http://kineto2.biowebdb.org/primer_designer/

Genotype (base calling and similarity): http://kineto2.biowebdb.org/genotype/

Third party software and Databases

Primer3 : http://www.biowebdb.org/primer3plus/

Weblogo : http://www.biowebdb.org/weblogo/

ReadSeq : http://www.biowebdb.org/readseq/

EMBOSS : http://emboss.biowebdb.org

BLAST : http://www.biowebdb.org/blast/

PDB : http://www.biowebdb.org/pdb/

wEMBOSS http://www.biowebdb.org/wEMBOSS/

login: wemboss
password: wemboss